FunnyBase Expressed Gene Database
Annotated Fundulus Heteroclitus EST Gene Expression Database
Web Interface to the Crawford Lab Databases
Current Loaded: 30342 EST sequences
Unique Contig Clusters: 13214 unique contigs
Search Tools
  • Annotation Search - Assembled ESTs
  • Browse Database
  • Blast Search
    • Assembled EST Annotation Search contigs and singletons
    (Recommended for Annotation Search)
    examples: kinase, ldh
    Contigs will contain at least one member
    from the data set/plate/well selected
    Contigs or singleton containing
    sequence name will be retrieved
    Max number of BLAST results to display per entry
    Contig Display Options:
    Display All Contig Members
    Display Minimum Cover Contig Members
    Do Not Display Contig Members (allow more records to be displayed per screen)
    Browse Sequencing Results for Individual Clones and Contigs
    Note: Wells which are included in the same contig will be displayed as separate results, as opposed to Assembled EST Annotation Search above
    Contigs will contain at least one member
    from the data set/plate/well selected
    Contigs or singleton containing
    sequence name will be retrieved
    Max number of BLAST results to display per entry
    Contig Display Options:
    Display All Contig Members
    Display Minimum Cover Contig Members
    Do Not Display Contig Members (allow more records to be displayed per screen)
    BLAST Search
    Enter query Sequence in FASTA format:

    Bioinformatics Database and Web Developer Justin Paschall
    jep67c@umkc.edu